Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR29541.1 | ACR29542.1 | bglu_1g24640 | bglu_1g24650 | FeS assembly protein IscX. | 2Fe-2S ferredoxin. | 0.994 |
ACR29541.1 | ACR29545.1 | bglu_1g24640 | bglu_1g24680 | FeS assembly protein IscX. | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | 0.846 |
ACR29541.1 | ACR29546.1 | bglu_1g24640 | bglu_1g24690 | FeS assembly protein IscX. | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.935 |
ACR29541.1 | ACR29548.1 | bglu_1g24640 | bglu_1g24710 | FeS assembly protein IscX. | BadM/Rrf2 family transcriptional regulator. | 0.508 |
ACR29541.1 | ACR31147.1 | bglu_1g24640 | bglu_2g07280 | FeS assembly protein IscX. | Class V aminotransferase. | 0.692 |
ACR29541.1 | hscB | bglu_1g24640 | bglu_1g24670 | FeS assembly protein IscX. | Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.966 |
ACR29541.1 | iscS | bglu_1g24640 | bglu_1g24700 | FeS assembly protein IscX. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.890 |
ACR29542.1 | ACR29541.1 | bglu_1g24650 | bglu_1g24640 | 2Fe-2S ferredoxin. | FeS assembly protein IscX. | 0.994 |
ACR29542.1 | ACR29545.1 | bglu_1g24650 | bglu_1g24680 | 2Fe-2S ferredoxin. | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | 0.946 |
ACR29542.1 | ACR29546.1 | bglu_1g24650 | bglu_1g24690 | 2Fe-2S ferredoxin. | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.983 |
ACR29542.1 | ACR29548.1 | bglu_1g24650 | bglu_1g24710 | 2Fe-2S ferredoxin. | BadM/Rrf2 family transcriptional regulator. | 0.652 |
ACR29542.1 | ACR31147.1 | bglu_1g24650 | bglu_2g07280 | 2Fe-2S ferredoxin. | Class V aminotransferase. | 0.764 |
ACR29542.1 | hscB | bglu_1g24650 | bglu_1g24670 | 2Fe-2S ferredoxin. | Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.988 |
ACR29542.1 | iscS | bglu_1g24650 | bglu_1g24700 | 2Fe-2S ferredoxin. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.973 |
ACR29545.1 | ACR29541.1 | bglu_1g24680 | bglu_1g24640 | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | FeS assembly protein IscX. | 0.846 |
ACR29545.1 | ACR29542.1 | bglu_1g24680 | bglu_1g24650 | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | 2Fe-2S ferredoxin. | 0.946 |
ACR29545.1 | ACR29546.1 | bglu_1g24680 | bglu_1g24690 | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.976 |
ACR29545.1 | ACR29548.1 | bglu_1g24680 | bglu_1g24710 | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | BadM/Rrf2 family transcriptional regulator. | 0.830 |
ACR29545.1 | ACR31147.1 | bglu_1g24680 | bglu_2g07280 | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | Class V aminotransferase. | 0.777 |
ACR29545.1 | hscB | bglu_1g24680 | bglu_1g24670 | Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family. | Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.985 |
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