STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR30640.1Rhs family protein. (1136 aa)    
Predicted Functional Partners:
ACR30727.1
Putative cytoplasmic protein.
  
 
 0.985
ACR30635.1
Type IV / VI secretion system protein, DotU family.
  
  
 0.623
ACR30639.1
Rhs family protein.
     
 0.604
ACR30638.1
Type VI secretion system Vgr family protein.
 
  
 0.596
ACR30633.1
Type VI secretion lipoprotein, VC_A0113 family.
 
  
 0.556
ACR30647.1
Virulence protein, SciE type.
 
  
 0.527
ACR30636.1
Type VI secretion protein IcmF.
 
  
 0.504
ACR30637.1
Type VI secretion system Vgr family protein.
 
  
 0.502
ACR30634.1
Type VI secretion protein, VC_A0110 family.
 
  
 0.500
ACR30686.1
Type VI secretion system Vgr family protein.
  
  
 0.492
Your Current Organism:
Burkholderia glumae
NCBI taxonomy Id: 626418
Other names: B. glumae BGR1, Burkholderia glumae BGR1, Burkholderia glumae str. BGR1, Burkholderia glumae strain BGR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.