ACR30693.1 protein (Burkholderia glumae) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

ACR30693.1

ImcF domain-containing protein. (1173 aa)

Predicted Functional Partners:

rpsT

0.914

rplU

0.910

rpmB

0.910

rpsP

0.908

rpmF

0.908

rplM

0.906

rpmI

0.906

rpsO

0.903

rplS

0.901

rpsL

0.900

Your Current Organism:

Burkholderia glumae

NCBI taxonomy Id: 626418
Other names: B. glumae BGR1, Burkholderia glumae BGR1, Burkholderia glumae str. BGR1, Burkholderia glumae strain BGR1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACR30693.1	rplM	bglu_2g02210	bglu_1g05690	ImcF domain-containing protein.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.906
ACR30693.1	rplS	bglu_2g02210	bglu_1g09060	ImcF domain-containing protein.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.901
ACR30693.1	rplU	bglu_2g02210	bglu_1g04830	ImcF domain-containing protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.910
ACR30693.1	rpmB	bglu_2g02210	bglu_1g28680	ImcF domain-containing protein.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.910
ACR30693.1	rpmF	bglu_2g02210	bglu_1g09480	ImcF domain-containing protein.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.908
ACR30693.1	rpmI	bglu_2g02210	bglu_1g21500	ImcF domain-containing protein.	50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.906
ACR30693.1	rpsL	bglu_2g02210	bglu_1g02530	ImcF domain-containing protein.	30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.900
ACR30693.1	rpsO	bglu_2g02210	bglu_1g25990	ImcF domain-containing protein.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.903
ACR30693.1	rpsP	bglu_2g02210	bglu_1g09030	ImcF domain-containing protein.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.908
ACR30693.1	rpsT	bglu_2g02210	bglu_1g29160	ImcF domain-containing protein.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.914
rplM	ACR30693.1	bglu_1g05690	bglu_2g02210	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	ImcF domain-containing protein.	0.906
rplM	rplS	bglu_1g05690	bglu_1g09060	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.995
rplM	rplU	bglu_1g05690	bglu_1g04830	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
rplM	rpmB	bglu_1g05690	bglu_1g28680	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplM	rpmF	bglu_1g05690	bglu_1g09480	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.992
rplM	rpmI	bglu_1g05690	bglu_1g21500	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.993
rplM	rpsL	bglu_1g05690	bglu_1g02530	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.997
rplM	rpsO	bglu_1g05690	bglu_1g25990	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
rplM	rpsP	bglu_1g05690	bglu_1g09030	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rplM	rpsT	bglu_1g05690	bglu_1g29160	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993