Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR28851.1 | ACR31853.1 | bglu_1g17140 | bglu_2g14960 | Bacteriophage replication protein. | TonB-dependent receptor. | 0.537 |
ACR28851.1 | ACR32289.1 | bglu_1g17140 | bglu_2g19660 | Bacteriophage replication protein. | Alpha/beta hydrolase fold protein. | 0.516 |
ACR31384.1 | ACR31458.2 | bglu_2g09800 | bglu_2g10570 | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | Putative transmembrane sensor. | 0.771 |
ACR31384.1 | ACR31607.1 | bglu_2g09800 | bglu_2g12250 | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | TonB-dependent siderophore receptor. | 0.508 |
ACR31384.1 | ACR31608.1 | bglu_2g09800 | bglu_2g12260 | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | Fe2+-dicitrate sensor, membrane component. | 0.890 |
ACR31384.1 | ACR31853.1 | bglu_2g09800 | bglu_2g14960 | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | TonB-dependent receptor. | 0.633 |
ACR31384.1 | ACR31854.1 | bglu_2g09800 | bglu_2g14970 | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | Peptidase. | 0.518 |
ACR31384.1 | ACR31856.1 | bglu_2g09800 | bglu_2g14990 | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | TonB-dependent siderophore receptor. | 0.406 |
ACR31384.1 | ACR32000.1 | bglu_2g09800 | bglu_2g16600 | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | TonB-dependent receptor. | 0.614 |
ACR31458.2 | ACR31384.1 | bglu_2g10570 | bglu_2g09800 | Putative transmembrane sensor. | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | 0.771 |
ACR31458.2 | ACR31607.1 | bglu_2g10570 | bglu_2g12250 | Putative transmembrane sensor. | TonB-dependent siderophore receptor. | 0.683 |
ACR31458.2 | ACR31608.1 | bglu_2g10570 | bglu_2g12260 | Putative transmembrane sensor. | Fe2+-dicitrate sensor, membrane component. | 0.930 |
ACR31458.2 | ACR31853.1 | bglu_2g10570 | bglu_2g14960 | Putative transmembrane sensor. | TonB-dependent receptor. | 0.582 |
ACR31458.2 | ACR31854.1 | bglu_2g10570 | bglu_2g14970 | Putative transmembrane sensor. | Peptidase. | 0.470 |
ACR31458.2 | ACR31856.1 | bglu_2g10570 | bglu_2g14990 | Putative transmembrane sensor. | TonB-dependent siderophore receptor. | 0.600 |
ACR31607.1 | ACR31384.1 | bglu_2g12250 | bglu_2g09800 | TonB-dependent siderophore receptor. | Ferric coprogen and ferric-rhodotorulic acid outer membrane receptor. | 0.508 |
ACR31607.1 | ACR31458.2 | bglu_2g12250 | bglu_2g10570 | TonB-dependent siderophore receptor. | Putative transmembrane sensor. | 0.683 |
ACR31607.1 | ACR31608.1 | bglu_2g12250 | bglu_2g12260 | TonB-dependent siderophore receptor. | Fe2+-dicitrate sensor, membrane component. | 0.901 |
ACR31607.1 | ACR31853.1 | bglu_2g12250 | bglu_2g14960 | TonB-dependent siderophore receptor. | TonB-dependent receptor. | 0.711 |
ACR31607.1 | ACR31854.1 | bglu_2g12250 | bglu_2g14970 | TonB-dependent siderophore receptor. | Peptidase. | 0.426 |
page 1 of 3