STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1Rab GTPase-activating protein 1. (188 aa)    
Predicted Functional Partners:
Rabgap1
Rab GTPase-activating protein 1.
 
     0.931
RABGAP1L
Rab GTPase-activating protein 1-like.
 
      0.900
Rab6a
Ras-related protein Rab-6A.
    
 0.698
RAB6A
Ras-related protein Rab-6A.
    
 0.698
YPT6
GTP-binding protein YPT6.
    
 0.685
Tcan_15393
Uncharacterized protein.
    
 0.638
RAB5B
Ras-related protein Rab-5B.
    
 0.636
Gga1
ADP-ribosylation factor-binding protein GGA1.
    
 0.636
GAPVD1
GTPase-activating protein and VPS9 domain-containing protein 1.
   
  0.618
RAB43
Ras-related protein Rab-43.
    
 0.616
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.