STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tulp4Tubby-related protein 4; Belongs to the TUB family. (996 aa)    
Predicted Functional Partners:
CUL5
Cullin-5; Belongs to the cullin family.
    
 0.789
RNF7
RING-box protein 2.
    
  0.710
TCEB2
Transcription elongation factor B polypeptide 2.
    
  0.702
Roc1a
RING-box protein 1A.
    
  0.685
CAND1
Cullin-associated Nedd8-dissociated protein 1.
   
 
 0.672
CAND1-2
Cullin-associated Nedd8-dissociated protein 1.
   
 
 0.672
SPSB4
SPRY domain-containing SOCS box protein 4.
   
 
  0.667
Socs5
Suppressor of cytokine signaling 5.
   
 
  0.665
Cand2
Cullin-associated Nedd8-dissociated protein 2.
   
 
 0.658
CSN5
COP9 signalosome complex subunit 5.
   
 
  0.646
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.