STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem33Transmembrane protein 33. (268 aa)    
Predicted Functional Partners:
npp-15
Nuclear pore complex protein 15.
    
 
 0.636
rtn1
Reticulon-like protein.
    
 
 0.614
Rtn4
Reticulon-like protein.
    
 
 0.614
Tcan_09539
Late embryogenesis abundant protein 76.
    
 
 0.614
Sec13
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
      
 0.595
Tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 
 0.552
SLC30A9
Zinc transporter 9.
   
  
 0.547
Nup62
Nuclear pore glycoprotein p62.
    
 
 0.461
Ahctf1
Protein ELYS.
      
 0.451
FAM8A1
Protein FAM8A1.
      
 0.451
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.