STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apl-1Beta-amyloid-like protein. (623 aa)    
Predicted Functional Partners:
APBB2
Amyloid beta A4 protein-binding family B member 2.
    
 0.980
Cont
Contactin.
   
 
 0.957
lin-10
Protein lin-10.
   
 
 0.945
ula-1
Nedd8-activating enzyme E1 regulatory subunit.
    
 0.926
aph-2
Nicastrin.
    
 0.911
SYT4
Synaptotagmin-4.
   
 
 0.890
Tmprss9
Transmembrane protease serine 9; Belongs to the peptidase S1 family.
    
 0.880
F10
Coagulation factor X isoform 1; Belongs to the peptidase S1 family.
    
 0.880
Tcan_08690
Uncharacterized protein.
    
 0.880
unc-89-3
Muscle M-line assembly protein unc-89.
   
 0.839
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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