STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF5BEukaryotic translation initiation factor 5B. (103 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.999
rps-3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.972
Rps9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.968
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.963
rpl-8
60S ribosomal protein L8.
  
 0.956
Tcan_18866
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.956
rpl-5
60S ribosomal protein L5.
  
 
 0.952
rps-14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.948
Rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.945
Rpl23a
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.945
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.