STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_02189Uncharacterized protein. (75 aa)    
Predicted Functional Partners:
CDC40
Pre-mRNA-processing factor 17.
   
 0.983
let-858
Pre-mRNA-splicing factor CWC22-like protein.
    
 0.980
mog-1
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1.
    
 0.976
syf-2
Pre-mRNA-splicing factor syf-2.
    
 0.976
Cwc25
Pre-mRNA-splicing factor CWC25-like protein.
   
 0.967
Ccdc94
Coiled-coil domain-containing protein 94.
   
 0.967
EFTUD2
U5 small nuclear ribonucleoprotein component.
    
 
 0.961
Cdc5l
Cell division cycle 5-like protein.
   
 
 0.961
prp-8
Pre-mRNA-splicing factor 8-like protein.
   
 
 0.958
snr-4
Small nuclear ribonucleoprotein Sm D2.
    
 0.957
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.