STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_02170WD repeat-containing protein 48-like protein. (100 aa)    
Predicted Functional Partners:
usp-46
Ubiquitin carboxyl-terminal hydrolase.
   
 0.998
WDR20
WD repeat-containing protein 20.
    
 0.996
Tcan_02385
FANCI_HD2 domain-containing protein.
    
 0.990
Tcan_07797
Uncharacterized protein.
    
 0.964
RpS27A
Ubiquitin-40S ribosomal protein S27a.
    
 0.957
FANCD2
Fanconi anemia group D2 protein.
    
 0.946
ubq-1
Polyubiquitin-A.
    
 0.940
ubq-1-2
Polyubiquitin-A.
    
 0.940
ubq-1-3
Polyubiquitin-A.
    
 0.940
ubq-2
Ubiquitin-60S ribosomal protein L40.
    
  0.930
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.