STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dis-3-2Putative exosome complex exonuclease RRP44. (110 aa)    
Predicted Functional Partners:
Exosc10
Exosome component 10.
  
 0.979
exos-4.1
Putative exosome complex component RRP41.
  
 0.969
EXOSC5
Exosome complex component RRP46.
  
 0.968
EXOSC7
Exosome complex component RRP42.
   
 0.966
Exosc1
Exosome complex component CSL4.
   
 0.966
EXOSC9
Exosome complex component RRP45.
   
 0.966
EXOSC2
Exosome complex component RRP4.
   
 0.963
EXOSC3
Exosome complex component RRP40.
   
 0.962
HBS1L
HBS1-like protein.
   
 0.957
C1D
Nuclear nucleic acid-binding protein C1D.
   
 
 0.892
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.