STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR7WD repeat-containing protein 7. (1526 aa)    
Predicted Functional Partners:
leo1
RNA polymerase-associated protein LEO1.
   
 0.994
TTC37
Tetratricopeptide repeat protein 37.
    
 0.960
CDC73
Parafibromin.
    
 0.896
paf1
RNA polymerase II-associated factor 1-like protein.
   
 0.879
SKIV2L
Helicase SKI2W.
    
 0.878
SKIV2L-2
Helicase SKI2W.
    
 0.878
ctr9
RNA polymerase-associated protein CTR9-like protein.
    
 0.865
ced-3
Cell death protein 3; Belongs to the peptidase C14A family.
    
 0.858
ddx20
Putative ATP-dependent RNA helicase DDX20.
   
 0.838
HBS1L
HBS1-like protein.
    
 0.819
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.