STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_04482Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
rpb-2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.945
R08D7.2
Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2.
   
 0.832
Polr3b
DNA-directed RNA polymerase III subunit RPC2; Belongs to the RNA polymerase beta chain family.
   
 0.806
Polr1b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.802
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.801
Polr2d
DNA-directed RNA polymerase II subunit RPB4.
    
  0.791
RpII15
DNA-directed RNA polymerase II subunit RPB9; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.786
Polr2g
DNA-directed RNA polymerase II subunit RPB7.
    
 0.774
rpb-5
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.769
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.768
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.