STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_01223Accumulation-associated protein. (121 aa)    
Predicted Functional Partners:
Tcan_05706
Uncharacterized protein.
    
 0.877
SMC6
Structural maintenance of chromosomes protein 6.
   
 0.869
Tcan_17523
SP-RING-type domain-containing protein.
    
 0.867
SMC5
Structural maintenance of chromosomes protein 5.
    
 0.759
Smc5
Structural maintenance of chromosomes protein 5.
    
 0.759
smc5
Structural maintenance of chromosomes protein 5.
    
 0.759
Smc1a
Structural maintenance of chromosomes protein.
   
 0.710
Smc3
Structural maintenance of chromosomes protein 3.
    
 0.660
smc3
Structural maintenance of chromosomes protein 3.
    
 0.660
smc3-2
Structural maintenance of chromosomes protein 3.
    
 0.660
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.