ZK507.1-2 protein (Toxocara canis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ZK507.1-2

Putative serine/threonine-protein kinase. (528 aa)

Predicted Functional Partners:

ltv1

0.680

byn-1

0.652

Riok2

0.650

tag-151

0.642

fau

0.637

per

0.618

rps-3

0.611

NOB1

0.599

Tcan_01610

0.599

RpS8

0.595

Your Current Organism:

Toxocara canis

NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NOB1	Riok2	A0A0B2UNX4	A0A0B2W1E9	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.994
NOB1	RpS8	A0A0B2UNX4	A0A0B2V6N2	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.963
NOB1	ZK507.1-2	A0A0B2UNX4	A0A0B2USM2	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Putative serine/threonine-protein kinase.	0.599
NOB1	byn-1	A0A0B2UNX4	A0A0B2V5F5	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Cell adhesion protein byn-1.	0.998
NOB1	fau	A0A0B2UNX4	A0A0B2VGA7	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
NOB1	ltv1	A0A0B2UNX4	A0A0B2VWP9	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Protein LTV1-like protein.	0.998
NOB1	rps-3	A0A0B2UNX4	A0A0B2V3V0	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.942
NOB1	tag-151	A0A0B2UNX4	A0A0B2V0A7	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Pre-rRNA-processing protein TSR1-like protein.	0.997
Riok2	NOB1	A0A0B2W1E9	A0A0B2UNX4	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.994
Riok2	RpS8	A0A0B2W1E9	A0A0B2V6N2	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.983
Riok2	Tcan_01610	A0A0B2W1E9	A0A0B2UWW4	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Uncharacterized protein.	0.994
Riok2	ZK507.1-2	A0A0B2W1E9	A0A0B2USM2	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Putative serine/threonine-protein kinase.	0.650
Riok2	byn-1	A0A0B2W1E9	A0A0B2V5F5	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Cell adhesion protein byn-1.	0.998
Riok2	fau	A0A0B2W1E9	A0A0B2VGA7	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
Riok2	ltv1	A0A0B2W1E9	A0A0B2VWP9	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Protein LTV1-like protein.	0.999
Riok2	rps-3	A0A0B2W1E9	A0A0B2V3V0	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
Riok2	tag-151	A0A0B2W1E9	A0A0B2V0A7	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	Pre-rRNA-processing protein TSR1-like protein.	0.999
RpS8	NOB1	A0A0B2V6N2	A0A0B2UNX4	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.963
RpS8	Riok2	A0A0B2V6N2	A0A0B2W1E9	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.	0.983
RpS8	Tcan_01610	A0A0B2V6N2	A0A0B2UWW4	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	Uncharacterized protein.	0.959