STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgc-50Ligand-gated ion channel 50; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (460 aa)    
Predicted Functional Partners:
Rdl-2
Gamma-aminobutyric acid receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.651
Rdl
Gamma-aminobutyric acid receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.645
GABRA3
Gamma-aminobutyric acid receptor subunit alpha-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
 
0.614
GABRA6
Gamma-aminobutyric acid receptor subunit alpha-6; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.585
Rdl-4
Gamma-aminobutyric acid receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.574
Tcan_15310
Uncharacterized protein.
    
  0.529
gab-1
Gamma-aminobutyric acid receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.517
cup-4-2
Acetylcholine receptor-like protein cup-4.
  
   
 0.466
GABRB4
Gamma-aminobutyric acid receptor subunit beta-4; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
0.427
GABRB1
Gamma-aminobutyric acid receptor subunit beta-1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
 
0.424
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.