STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rdl-3Gamma-aminobutyric acid receptor subunit beta. (233 aa)    
Predicted Functional Partners:
GABRA6
Gamma-aminobutyric acid receptor subunit alpha-6; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.758
GABRA3
Gamma-aminobutyric acid receptor subunit alpha-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.739
Tcan_15310
Uncharacterized protein.
   
 0.739
TRAK1
Trafficking kinesin-binding protein 1.
    
 0.650
GluClalpha-7
Glutamate-gated chloride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
  0.605
Glra3-2
Glycine receptor subunit alpha-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
 
  0.598
ggr-1
Glycine receptor subunit beta-type 4.
  
 
  0.573
lgc-50-18
Ligand-gated ion channel 50.
  
 
  0.529
lgg-2
Protein lgg-2.
     
 0.523
lgg-1-2
Protein lgg-1.
     
 0.523
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.