STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
URI1Unconventional prefoldin RPB5 interactor 1. (467 aa)    
Predicted Functional Partners:
rpb-5
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 
 0.934
Tcan_12925
Protein UXT-like protein.
    
 
 0.930
pdf-2
Prefoldin subunit 2.
    
 
 0.912
ruvbl2
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.870
pfd-6
Putative prefoldin subunit 6.
    
 
 0.861
Pdrg1
P53 and DNA damage-regulated protein 1.
    
 
 0.752
pfd-5
Putative prefoldin subunit 5.
    
 
 0.686
PFDN4
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
    
 
 0.631
rpac-19
Putative DNA-directed RNA polymerases I and III subunit RPAC2.
   
   0.621
Polr3e
DNA-directed RNA polymerase III subunit RPC5.
    
   0.612
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.