STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A3Collagen alpha-3(VI) chain. (145 aa)    
Predicted Functional Partners:
KAP115
Kinesin-associated protein 3.
   
 0.904
ubh-4
Ubiquitin carboxyl-terminal hydrolase.
    
 0.814
IFT80
Intraflagellar transport protein 80-like protein.
    
 0.737
KIF11
Kinesin-like protein KIF11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.726
ift122
Intraflagellar transport protein-like protein.
    
 0.705
ogt-1
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase.
    
 0.698
Zw10
Centromere/kinetochore protein zw10-like protein.
     
 0.687
HCFC1
Host cell factor 1.
    
 0.670
arr-1
Putative beta-arrestin.
    
 0.662
CENPE
Centromere-associated protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.659
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.