STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_14748Amino_oxidase domain-containing protein. (502 aa)    
Predicted Functional Partners:
Ptchd3-3
Patched domain-containing protein 3.
   
    0.901
FANCM
Fanconi anemia group M protein.
    
 0.883
Tcan_13628
Acetyltransf_18 domain-containing protein.
   
    0.838
F52C9.5-5
Uncharacterized protein F52C9.5.
   
  0.827
Tcan_06414
Uncharacterized protein.
   
    0.790
lin-54
Protein lin-54.
    
 0.700
rbbp7
Histone-binding protein RBBP7.
    
 0.695
Tcan_07084
Apple domain-containing protein.
   
    0.691
Tcan_18341
Uncharacterized protein.
   
    0.691
let-23
Receptor protein-tyrosine kinase.
    
 0.649
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.