STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD2Chromodomain-helicase-DNA-binding protein 2. (94 aa)    
Predicted Functional Partners:
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.756
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 0.753
htz-1
Histone H2A; Belongs to the histone H2A family.
    
 0.739
pcn-1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.727
rbbp7
Histone-binding protein RBBP7.
    
 0.722
XPA
DNA repair protein complementing XP-A cells-like protein.
  
 
 0.721
Polr2d
DNA-directed RNA polymerase II subunit RPB4.
    
 0.719
FANCM
Fanconi anemia group M protein.
   
 0.712
Polr2j
DNA-directed RNA polymerase II subunit RPB11.
    
 0.709
POLR2K
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.708
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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