STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gta-1Putative 4-aminobutyrate aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (512 aa)    
Predicted Functional Partners:
Aldh5a1
Succinate-semialdehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
  
 0.940
alh-13
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.926
gei-7
Bifunctional glyoxylate cycle protein.
  
 
 0.908
eryA
Erythronolide synthase, modules 3 and 4; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.906
lgrB
Linear gramicidin synthase subunit B.
  
 
 0.906
GAD1
Glutamate decarboxylase 1.
  
 0.890
aldh9A1
Aldehyde dehydrogenase family 9 member A1.
  
 0.885
ALDH3A2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.882
aldh9a1a
Aldehyde dehydrogenase family 9 member A1-A; Belongs to the aldehyde dehydrogenase family.
  
 0.882
alh-9
Putative aldehyde dehydrogenase family 7 member A1-like protein; Belongs to the aldehyde dehydrogenase family.
  
 0.882
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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