STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smo-1Small ubiquitin-related modifier. (69 aa)    
Predicted Functional Partners:
aos-1
SUMO-activating enzyme subunit aos-1.
   
 0.987
uba2
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.985
ran-2
Ran GTPase-activating protein 2.
    
 0.984
pcn-1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.982
gei-17
E3 SUMO-protein ligase gei-17.
    
 0.982
ulp-1
Sentrin-specific protease.
   
 0.976
ubc-9
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.968
ubc-9-2
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.968
Tcan_16540
Uncharacterized protein.
   
 0.963
Nup62
Nuclear pore glycoprotein p62.
   
 0.959
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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