Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cbp20 | SRSF12 | A0A0B2UP78 | A0A0B2UVY4 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Serine/arginine-rich splicing factor 12. | 0.809 |
| Cbp20 | Srsf4 | A0A0B2UP78 | A0A0B2UUP1 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Serine/arginine-rich splicing factor 4. | 0.927 |
| Cbp20 | Tcan_12596 | A0A0B2UP78 | A0A0B2V0P6 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Uncharacterized protein. | 0.831 |
| Cbp20 | Tra2a | A0A0B2UP78 | A0A0B2UVB7 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Transformer-2-like protein alpha. | 0.831 |
| Cbp20 | alyref-b | A0A0B2UP78 | A0A0B2UVY6 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | THO complex subunit 4-B. | 0.988 |
| Cbp20 | nxf-1 | A0A0B2UP78 | A0A0B2VK97 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Nuclear RNA export factor 1. | 0.995 |
| Cbp20 | rsp-6 | A0A0B2UP78 | A0A0B2VUB8 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Putative splicing factor, arginine/serine-rich 6. | 0.809 |
| Cbp20 | rsp-6-2 | A0A0B2UP78 | A0A0B2VW63 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Putative splicing factor, arginine/serine-rich 6. | 0.809 |
| Cbp20 | rsp-6-3 | A0A0B2UP78 | A0A0B2W2F0 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | Putative splicing factor, arginine/serine-rich 6. | 0.822 |
| Cbp20 | uaf-1 | A0A0B2UP78 | A0A0B2VAI3 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.965 |
| SRSF12 | Cbp20 | A0A0B2UVY4 | A0A0B2UP78 | Serine/arginine-rich splicing factor 12. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.809 |
| SRSF12 | Srsf4 | A0A0B2UVY4 | A0A0B2UUP1 | Serine/arginine-rich splicing factor 12. | Serine/arginine-rich splicing factor 4. | 0.914 |
| SRSF12 | Tcan_12596 | A0A0B2UVY4 | A0A0B2V0P6 | Serine/arginine-rich splicing factor 12. | Uncharacterized protein. | 0.900 |
| SRSF12 | Tra2a | A0A0B2UVY4 | A0A0B2UVB7 | Serine/arginine-rich splicing factor 12. | Transformer-2-like protein alpha. | 0.924 |
| SRSF12 | alyref-b | A0A0B2UVY4 | A0A0B2UVY6 | Serine/arginine-rich splicing factor 12. | THO complex subunit 4-B. | 0.697 |
| SRSF12 | nxf-1 | A0A0B2UVY4 | A0A0B2VK97 | Serine/arginine-rich splicing factor 12. | Nuclear RNA export factor 1. | 0.555 |
| SRSF12 | rsp-6 | A0A0B2UVY4 | A0A0B2VUB8 | Serine/arginine-rich splicing factor 12. | Putative splicing factor, arginine/serine-rich 6. | 0.913 |
| SRSF12 | rsp-6-2 | A0A0B2UVY4 | A0A0B2VW63 | Serine/arginine-rich splicing factor 12. | Putative splicing factor, arginine/serine-rich 6. | 0.931 |
| SRSF12 | rsp-6-3 | A0A0B2UVY4 | A0A0B2W2F0 | Serine/arginine-rich splicing factor 12. | Putative splicing factor, arginine/serine-rich 6. | 0.934 |
| SRSF12 | uaf-1 | A0A0B2UVY4 | A0A0B2VAI3 | Serine/arginine-rich splicing factor 12. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.668 |
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