STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rab27aRas-related protein Rab-27A. (216 aa)    
Predicted Functional Partners:
aex-3
MAP kinase-activating death domain protein.
     
 0.860
Rep
Rab proteins geranylgeranyltransferase component A.
    
 0.846
rab-3
Ras-related protein Rab-3.
  
  
0.822
rbf-1
Rabphilin-1.
    
 
 0.819
Cd63
Tetraspanin.
     
 0.790
RAB11A
Ras-related protein Rab-11A.
  
  
0.783
RAB11A-2
Ras-related protein Rab-11A.
  
  
0.783
RAB10
Ras-related protein Rab-10.
  
  
0.776
Rab8b
Ras-related protein Rab-8B.
  
  
0.775
MYO5A
Unconventional myosin-Va.
    
 0.769
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.