STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_07728FAM203 family protein. (269 aa)    
Predicted Functional Partners:
Ttc4
Tetratricopeptide repeat protein 4.
   
 
 0.942
Wdr43
WD repeat-containing protein 43.
   
   0.819
Y54E10A.10
Ribosome production factor 2-like protein.
   
    0.775
F55F8.3
Periodic tryptophan protein 2-like protein.
   
   0.746
Trmt61a
tRNA (Adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A.
   
   0.729
Grwd1
Glutamate-rich WD repeat-containing protein 1.
   
    0.725
rrbs-1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.717
Tcan_14639
Ribosomal L1 domain-containing protein.
   
    0.703
rpl-24.2
Putative ribosome biogenesis protein RLP24.
   
    0.700
PWP1
Periodic tryptophan protein 1-like protein.
   
  
 0.695
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.