STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEKProtein DEK. (532 aa)    
Predicted Functional Partners:
UPF1
Regulator of nonsense transcripts 1.
    
 
 0.921
Upf1
Regulator of nonsense transcripts 1.
    
 
 0.921
sf3b1
Splicing factor 3B subunit 1.
   
 
 0.866
Mybbp1a
Myb-binding protein 1A.
     
 0.821
BAZ1A-2
Bromodomain adjacent to zinc finger domain protein 1A.
    
 0.812
Iswi
Chromatin-remodeling complex ATPase chain Iswi.
   
 0.776
ERCC6
DNA excision repair protein ERCC-6.
    
 0.762
Chd1l
Chromodomain-helicase-DNA-binding protein 1-like.
   
 0.736
ERCC6-2
DNA excision repair protein ERCC-6.
    
 0.730
BAZ1A
Bromodomain adjacent to zinc finger domain protein 1A.
    
 0.729
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.