STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_01295Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
ubc-9
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.681
ubc-9-2
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.681
F52C9.5-5
Uncharacterized protein F52C9.5.
    
  0.576
aos-1
SUMO-activating enzyme subunit aos-1.
    
 0.531
ERCC6
DNA excision repair protein ERCC-6.
    
  0.508
ERCC6-2
DNA excision repair protein ERCC-6.
    
  0.508
uba2
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
    
 0.463
smo-1
Small ubiquitin-related modifier.
   
  0.449
smo-1-2
Small ubiquitin-related modifier.
   
  0.449
T24H10.1
Putative transcription elongation factor S-II.
    
  0.430
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.