STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lsm14b-bProtein LSM14-like protein B-B. (299 aa)    
Predicted Functional Partners:
Dcp2
M7GpppN-mRNA hydrolase.
    
 
 0.855
Dcp1a
mRNA-decapping enzyme 1A.
    
 
 0.837
Edc3
Enhancer of mRNA-decapping protein 3.
    
 
 0.819
Eif4enif1
Eukaryotic translation initiation factor 4E transporter.
   
 
 0.801
Tcan_04785
Uncharacterized protein.
   
 
 0.801
cgh-1
ATP-dependent RNA helicase cgh-1.
   
 
 0.786
cgh-1-2
ATP-dependent RNA helicase cgh-1; Belongs to the DEAD box helicase family.
   
 
 0.786
cgh-1-3
ATP-dependent RNA helicase cgh-1.
   
 
 0.786
cgh-1-4
ATP-dependent RNA helicase cgh-1; Belongs to the DEAD box helicase family.
   
 
 0.786
patr-1
Protein PAT1-like protein 1.
   
 
 0.640
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.