STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddx49Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. (601 aa)    
Predicted Functional Partners:
Sas10
Something about silencing protein 10.
   
 0.997
nol6
Nucleolar protein 6.
   
 0.993
ABT1
Activator of basal transcription 1.
   
 
 0.991
Wdr46
WD repeat-containing protein 46.
   
 0.983
DDX52
Putative ATP-dependent RNA helicase DDX52.
  
0.978
PDCD11
Protein RRP5-like protein.
  
 0.975
diexf
Digestive organ expansion factor-like protein.
   
 
 0.974
ngdn
Neuroguidin.
   
 0.973
Y39A1A.14
Ribosomal RNA small subunit methyltransferase nep-1.
   
 0.971
byn-1
Cell adhesion protein byn-1.
   
 
 0.971
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.