STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sf3a3Splicing factor 3A subunit 3. (535 aa)    
Predicted Functional Partners:
snr-3
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.999
ddx46
Putative ATP-dependent RNA helicase DDX46.
   
 0.999
Snrpb2
U2 small nuclear ribonucleoprotein B.
   
 0.999
SF3A1
Splicing factor 3A subunit 1.
   
 0.999
Sf3a2
Splicing factor 3A subunit 2.
    
 0.999
SF3B2
Splicing factor 3B subunit 2.
   
 0.999
mog-2
Putative U2 small nuclear ribonucleoprotein A.
   
 0.999
Cdc5l
Cell division cycle 5-like protein.
   
 
 0.998
Prpf6
Pre-mRNA-processing factor 6.
   
 
 0.998
prp-19
Pre-mRNA-processing factor 19-like protein.
   
 
 0.997
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.