STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl4228S ribosomal protein L42, mitochondrial. (139 aa)    
Predicted Functional Partners:
mrpl-32
Putative 39S ribosomal protein L32, mitochondrial.
   
 
 0.980
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.974
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
    
 0.973
Mrpl20
39S ribosomal protein L20, mitochondrial.
   
 
 0.973
Mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.968
mrpl22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
   0.966
MRPL55
39S ribosomal protein L55, mitochondrial.
   
 
 0.963
MRPL21
39S ribosomal protein L21, mitochondrial.
   
 
 0.963
mrpl-35
Putative 39S ribosomal protein L35, mitochondrial.
   
 
 0.962
MRPL1
39S ribosomal protein L1, mitochondrial.
   
 
 0.961
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
Server load: low (26%) [HD]