STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T07A9.8Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (299 aa)    
Predicted Functional Partners:
KPNB1
Importin subunit beta-1.
    
   0.969
puf-12
Pumilio domain-containing protein 12.
   
 
 0.947
Y54E10A.10
Ribosome production factor 2-like protein.
   
   0.944
Tcan_12484
Putative RNA-binding protein.
   
   0.943
Rbm28
RNA-binding protein 28.
   
   0.942
K12H4.3
Ribosome biogenesis protein BRX1-like protein.
   
   0.941
byn-1
Cell adhesion protein byn-1.
   
 
 0.935
C18A3.3
Putative rRNA-processing protein EBP2-like protein.
   
   0.935
Ftsj3
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.934
dbe
KRR1 small subunit processome component-like protein.
   
   0.923
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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