STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCHS1Protocadherin-16. (2109 aa)    
Predicted Functional Partners:
Fat4
Protocadherin Fat 4.
  
0.798
hmp-1
Protein humpback-1.
    
 0.782
bar-1
Beta-catenin/armadillo-related protein 1.
    
 0.779
hmp-2
Protein humpback-2.
    
 0.779
jac-1
Juxtamembrane domain-associated catenin.
    
 0.741
jac-1-2
Juxtamembrane domain-associated catenin.
    
 0.741
Myo9a
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.666
MYO9B
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.666
Tcan_16263
Ras-associating domain-containing protein.
    
 0.666
deb-1
Vinculin.
    
 0.643
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.