STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gdh-2Glutamate dehydrogenase, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (544 aa)    
Predicted Functional Partners:
alh-13
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.930
fdxr
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.884
Eprs
Bifunctional glutamate/proline--tRNA ligase.
    
 0.862
glt1
Putative glutamate synthase [NADPH].
  
 0.861
Tcan_09768
Glutamate synthase [NADH], amyloplastic.
  
 0.861
Tcan_08920
Glutamate synthase 2 [NADH], chloroplastic.
  
 0.861
C16A3.10
Putative ornithine aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.842
T01C8.5
Aspartate aminotransferase.
   
 0.813
CAD
CAD protein.
  
 0.811
Idh2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.780
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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