STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rha-1Putative ATP-dependent RNA helicase A. (1351 aa)    
Predicted Functional Partners:
Myef2
Myelin expression factor 2.
   
 0.900
CDC40
Pre-mRNA-processing factor 17.
   
 0.882
Pabp2
Polyadenylate-binding protein 2.
   
 0.880
PABPN1
Polyadenylate-binding protein 2.
   
 0.880
alyref-b
THO complex subunit 4-B.
   
 0.868
Ddx17
Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family.
  
 0.858
DDX17
Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family.
  
 0.858
hel-1
Spliceosome RNA helicase DDX39B-like protein.
  
 0.852
ILF2
Interleukin enhancer-binding factor 2.
   
 
 0.838
prp-19
Pre-mRNA-processing factor 19-like protein.
   
 0.838
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.