STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESCO1N-acetyltransferase ESCO1. (166 aa)    
Predicted Functional Partners:
Pds5b
Sister chromatid cohesion protein PDS5-like protein B.
   
 0.971
rad21
Double-strand-break repair protein rad21-like protein.
   
 0.940
Smc3
Structural maintenance of chromosomes protein 3.
   
 0.939
smc3
Structural maintenance of chromosomes protein 3.
   
 0.939
smc3-2
Structural maintenance of chromosomes protein 3.
   
 0.939
pcn-1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.912
Smc1a
Structural maintenance of chromosomes protein.
   
 0.906
STAG1
Cohesin subunit SA-1.
   
 0.884
smc4
Structural maintenance of chromosomes protein.
   
 0.859
Tcan_13195
Uncharacterized protein.
   
 0.855
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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