STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL6A5-2Collagen alpha-5(VI) chain. (354 aa)    
Predicted Functional Partners:
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.754
unc-89-4
Muscle M-line assembly protein unc-89.
    
 0.754
unc-89-5
Muscle M-line assembly protein unc-89.
    
 0.754
lon-3-2
Cuticle collagen lon-3.
   
   
0.691
lon-3-6
Cuticle collagen lon-3.
  
    0.677
sqt-1-4
Cuticle collagen sqt-1.
  
   
0.621
met-2
Putative histone-lysine N-methyltransferase met-2.
    
 0.578
dpy-5-4
Cuticle collagen dpy-5.
  
    0.576
T05H10.3-3
Uncharacterized protein T05H10.3.
   
    0.574
T05H10.3-5
Uncharacterized protein T05H10.3.
   
    0.574
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.