STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf14RBR-type E3 ubiquitin transferase. (830 aa)    
Predicted Functional Partners:
ARIH1
RBR-type E3 ubiquitin transferase.
     
 0.538
arih1-2
RBR-type E3 ubiquitin transferase.
     
 0.538
Tcan_14958
Uncharacterized protein.
   
 
 0.537
GSPT1
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
   
 
 0.537
uba-3
Nedd8-activating enzyme E1 catalytic subunit.
   
 
  0.534
Atg7
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
     
 0.520
Ube4b
Ubiquitin conjugation factor E4 B.
     
 0.514
RNF141
RING finger protein.
   
 
  0.483
rnf19b
RBR-type E3 ubiquitin transferase.
     
0.477
arih1
RBR-type E3 ubiquitin transferase.
     
 0.477
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.