Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RFC5 | RPL40 | A0A0B2UNQ5 | A0A0B2VQT2 | Replication factor C subunit 5. | Ubiquitin-60S ribosomal protein L40. | 0.660 |
RFC5 | RpS27A | A0A0B2UNQ5 | A0A0B2VF69 | Replication factor C subunit 5. | Ubiquitin-40S ribosomal protein S27a. | 0.710 |
RFC5 | pcn-1 | A0A0B2UNQ5 | A0A0B2UYH8 | Replication factor C subunit 5. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.999 |
RFC5 | ubq-1 | A0A0B2UNQ5 | A0A0B2V0G7 | Replication factor C subunit 5. | Polyubiquitin-A. | 0.686 |
RFC5 | ubq-1-2 | A0A0B2UNQ5 | A0A0B2W1I2 | Replication factor C subunit 5. | Polyubiquitin-A. | 0.686 |
RFC5 | ubq-1-3 | A0A0B2UNQ5 | A0A0B2W2A1 | Replication factor C subunit 5. | Polyubiquitin-A. | 0.686 |
RFC5 | ubq-2 | A0A0B2UNQ5 | A0A0B2VKW1 | Replication factor C subunit 5. | Ubiquitin-60S ribosomal protein L40. | 0.660 |
RFC5 | usp20 | A0A0B2UNQ5 | A0A0B2V0I0 | Replication factor C subunit 5. | Ubiquitin carboxyl-terminal hydrolase 20; Belongs to the peptidase C19 family. | 0.733 |
RPL40 | RFC5 | A0A0B2VQT2 | A0A0B2UNQ5 | Ubiquitin-60S ribosomal protein L40. | Replication factor C subunit 5. | 0.660 |
RPL40 | RpS27A | A0A0B2VQT2 | A0A0B2VF69 | Ubiquitin-60S ribosomal protein L40. | Ubiquitin-40S ribosomal protein S27a. | 0.998 |
RPL40 | Traf1 | A0A0B2VQT2 | A0A0B2W4S6 | Ubiquitin-60S ribosomal protein L40. | TNF receptor-associated factor 1. | 0.838 |
RPL40 | pcn-1 | A0A0B2VQT2 | A0A0B2UYH8 | Ubiquitin-60S ribosomal protein L40. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.947 |
RPL40 | ubq-1 | A0A0B2VQT2 | A0A0B2V0G7 | Ubiquitin-60S ribosomal protein L40. | Polyubiquitin-A. | 0.950 |
RPL40 | ubq-1-2 | A0A0B2VQT2 | A0A0B2W1I2 | Ubiquitin-60S ribosomal protein L40. | Polyubiquitin-A. | 0.952 |
RPL40 | ubq-1-3 | A0A0B2VQT2 | A0A0B2W2A1 | Ubiquitin-60S ribosomal protein L40. | Polyubiquitin-A. | 0.950 |
RPL40 | usp20 | A0A0B2VQT2 | A0A0B2V0I0 | Ubiquitin-60S ribosomal protein L40. | Ubiquitin carboxyl-terminal hydrolase 20; Belongs to the peptidase C19 family. | 0.672 |
RpS27A | RFC5 | A0A0B2VF69 | A0A0B2UNQ5 | Ubiquitin-40S ribosomal protein S27a. | Replication factor C subunit 5. | 0.710 |
RpS27A | RPL40 | A0A0B2VF69 | A0A0B2VQT2 | Ubiquitin-40S ribosomal protein S27a. | Ubiquitin-60S ribosomal protein L40. | 0.998 |
RpS27A | Traf1 | A0A0B2VF69 | A0A0B2W4S6 | Ubiquitin-40S ribosomal protein S27a. | TNF receptor-associated factor 1. | 0.945 |
RpS27A | arr-1 | A0A0B2VF69 | A0A0B2W1D7 | Ubiquitin-40S ribosomal protein S27a. | Putative beta-arrestin. | 0.510 |
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