Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COG3 | VPS8 | A0A0B2VBA4 | A0A0B2V096 | Conserved oligomeric Golgi complex subunit 3. | Vacuolar protein sorting-associated protein 8-like protein. | 0.434 |
COG3 | Vps16 | A0A0B2VBA4 | A0A0B2VGQ0 | Conserved oligomeric Golgi complex subunit 3. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | 0.471 |
COG3 | Vps39 | A0A0B2VBA4 | A0A0B2W2S5 | Conserved oligomeric Golgi complex subunit 3. | Vam6/Vps39-like protein. | 0.458 |
COG3 | Vps45 | A0A0B2VBA4 | A0A0B2UPZ4 | Conserved oligomeric Golgi complex subunit 3. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.822 |
COG3 | spe-39 | A0A0B2VBA4 | A0A0B2V0L7 | Conserved oligomeric Golgi complex subunit 3. | Spermatogenesis-defective protein 39. | 0.457 |
Tmem186 | spe-39 | A0A0B2V4E1 | A0A0B2V0L7 | Transmembrane protein. | Spermatogenesis-defective protein 39. | 0.451 |
VPS8 | COG3 | A0A0B2V096 | A0A0B2VBA4 | Vacuolar protein sorting-associated protein 8-like protein. | Conserved oligomeric Golgi complex subunit 3. | 0.434 |
VPS8 | Vps16 | A0A0B2V096 | A0A0B2VGQ0 | Vacuolar protein sorting-associated protein 8-like protein. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | 0.997 |
VPS8 | Vps39 | A0A0B2V096 | A0A0B2W2S5 | Vacuolar protein sorting-associated protein 8-like protein. | Vam6/Vps39-like protein. | 0.989 |
VPS8 | Vps45 | A0A0B2V096 | A0A0B2UPZ4 | Vacuolar protein sorting-associated protein 8-like protein. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.623 |
VPS8 | spe-39 | A0A0B2V096 | A0A0B2V0L7 | Vacuolar protein sorting-associated protein 8-like protein. | Spermatogenesis-defective protein 39. | 0.602 |
VPS8 | vps-11 | A0A0B2V096 | A0A0B2UNW6 | Vacuolar protein sorting-associated protein 8-like protein. | Vacuolar protein sorting-associated protein 11-like protein. | 0.963 |
VPS8 | vps-11-2 | A0A0B2V096 | A0A0B2UQ15 | Vacuolar protein sorting-associated protein 8-like protein. | Vacuolar protein sorting-associated protein 11-like protein. | 0.968 |
VPS8 | vps-33.1 | A0A0B2V096 | A0A0B2VIJ4 | Vacuolar protein sorting-associated protein 8-like protein. | Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. | 0.993 |
VPS8 | vps18 | A0A0B2V096 | A0A0B2VMU7 | Vacuolar protein sorting-associated protein 8-like protein. | Vacuolar protein sorting-associated protein 18-like protein. | 0.997 |
Vps16 | COG3 | A0A0B2VGQ0 | A0A0B2VBA4 | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | Conserved oligomeric Golgi complex subunit 3. | 0.471 |
Vps16 | VPS8 | A0A0B2VGQ0 | A0A0B2V096 | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | Vacuolar protein sorting-associated protein 8-like protein. | 0.997 |
Vps16 | Vps39 | A0A0B2VGQ0 | A0A0B2W2S5 | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | Vam6/Vps39-like protein. | 0.999 |
Vps16 | Vps45 | A0A0B2VGQ0 | A0A0B2UPZ4 | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.893 |
Vps16 | spe-39 | A0A0B2VGQ0 | A0A0B2V0L7 | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | Spermatogenesis-defective protein 39. | 0.731 |
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