STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dom-3-2Decapping nuclease dom-3. (358 aa)    
Predicted Functional Partners:
EXOSC7
Exosome complex component RRP42.
   
   0.858
cids-1
CID domain-containing protein 1.
    
 
 0.832
Tcan_08441
Uncharacterized protein.
    
 
 0.832
xrn-2
5'-3' exoribonuclease 2-like protein.
   
 
 0.752
xrn-2-2
5'-3' exoribonuclease 2-like protein.
   
 
 0.752
xrn-2-3
5'-3' exoribonuclease 2-like protein.
   
 
 0.752
Tcan_04482
Uncharacterized protein.
    
 
 0.595
RPRD2
Regulation of nuclear pre-mRNA domain-containing protein 2.
    
 
 0.595
nol-9
Polynucleotide 5'-hydroxyl-kinase nol-9.
   
 
 0.586
Exosc10
Exosome component 10.
   
 
 0.509
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.