STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl-23Putative 39S ribosomal protein L23, mitochondrial. (158 aa)    
Predicted Functional Partners:
Mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.999
MRPL17
39S ribosomal protein L17, mitochondrial.
   
 
 0.999
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
   
 
 0.999
MRPS2
28S ribosomal protein S2, mitochondrial.
   
 
 0.998
mrps-16
Putative 28S ribosomal protein S16, mitochondrial.
   
 
 0.998
mrpl22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.998
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.997
MRPS12
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.997
tag-242
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
   
 
 0.997
mrps-15
28S ribosomal protein S15, mitochondrial.
   
 
 0.997
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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