STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_04587Uncharacterized protein. (452 aa)    
Predicted Functional Partners:
leo1
RNA polymerase-associated protein LEO1.
   
 0.989
iws-1
IWS1-like protein.
   
 0.989
spt-16
FACT complex subunit spt-16.
   
 0.980
spt-4
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.964
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.957
ctr9
RNA polymerase-associated protein CTR9-like protein.
  
 0.956
rpb-5
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.951
Polr2g
DNA-directed RNA polymerase II subunit RPB7.
    
 0.949
rpb-2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.949
Tcan_13301
Uncharacterized protein.
   
 0.947
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.