STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcan_16858Uncharacterized protein. (63 aa)    
Predicted Functional Partners:
Tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.944
chmp4b
Charged multivesicular body protein 4b.
   
 0.880
MVB12B
Multivesicular body subunit 12B.
     
 0.706
Tsg101
Tumor susceptibility transcribed protein.
    
 0.653
CHMP5
Charged multivesicular body protein 5.
    
 0.637
stam-1
Signal transducing adapter molecule 1.
   
 
 0.625
stambpa
STAM-binding protein-like A.
    
 
 0.568
Ipo5
Importin-5.
   
 
  0.552
Pdcd6
Programmed cell death protein 6.
    
 
 0.547
ubq-1
Polyubiquitin-A.
   
 
 0.529
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.