STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ced-7ABC transporter ced-7. (1634 aa)    
Predicted Functional Partners:
ABCA3
ATP-binding cassette sub-family A member 3.
  
  
 
0.768
EcR
Ecdysone receptor.
    
 0.714
COX15
Cytochrome c oxidase assembly protein COX15-like protein.
    
 0.672
Tcan_03579
Protein-serine/threonine kinase.
    
 0.653
GLC3
1,4-alpha-glucan-branching enzyme.
   
 
  0.629
GBE1
1,4-alpha-glucan-branching enzyme.
   
 
  0.629
GBE1-2
1,4-alpha-glucan-branching enzyme.
   
 
  0.629
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
  0.623
Igbp1
Immunoglobulin-binding protein 1.
    
 0.623
rxraa
Retinoic acid receptor RXR-alpha-A.
    
  0.583
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.