STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sin3aPaired amphipathic helix protein Sin3a. (1360 aa)    
Predicted Functional Partners:
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3.
   
 0.997
Tcan_08032
Uncharacterized protein C2F7.07c.
   
 
 0.994
rbbp7
Histone-binding protein RBBP7.
   
 0.991
ncor1
Nuclear receptor corepressor 1.
   
 0.986
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.955
hda-1
Histone deacetylase 1.
   
 0.955
Rpd3
Histone deacetylase Rpd3.
   
 0.955
hdac1-b
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.955
hda-1-3
Histone deacetylase 1.
   
 0.955
Tcan_18706
Mortality factor 4-like protein 1.
   
 0.941
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.