STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUFY1RUN and FYVE domain-containing protein 1. (567 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance-associated protein.
    
 0.920
Wdfy3
WD repeat and FYVE domain-containing protein 3.
   
 
 0.825
WDFY3
WD repeat and FYVE domain-containing protein 3.
   
 
 0.825
WDFY3-2
WD repeat and FYVE domain-containing protein 3.
   
 
 0.825
WDFY3-3
WD repeat and FYVE domain-containing protein 3.
   
 
0.825
rab4b
Ras-related protein Rab-4B.
    
 0.783
F20H11.1
Differentially expressed in FDCP 8-like protein.
    
 0.766
Vps45
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.643
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.594
Atg6
Beclin-1-like protein.
    
 
 0.571
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.