STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HmgclHydroxymethylglutaryl-CoA lyase, mitochondrial. (340 aa)    
Predicted Functional Partners:
Bcat1
Branched-chain-amino-acid aminotransferase, cytosolic.
  
 0.989
bcat-1-2
Branched-chain-amino-acid aminotransferase, cytosolic.
  
 0.989
idhb-1
Putative isocitrate dehydrogenase [NAD] subunit beta, mitochondrial.
  
 0.977
idha-1
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.977
Idh3g
Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial; Belongs to the peptidase S1 family.
  
 0.977
Idh3g-2
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.977
T26C12.1
Acetolactate synthase-like protein; Belongs to the TPP enzyme family.
  
 
 0.966
F02A9.4
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
 
 0.952
gei-7
Bifunctional glyoxylate cycle protein.
  
 
 0.950
GLO3
Peroxisomal (S)-2-hydroxy-acid oxidase GLO3.
    
 0.934
Your Current Organism:
Toxocara canis
NCBI taxonomy Id: 6265
Other names: T. canis, dog roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.